CDS
| Accession Number | TCMCG006C45217 |
| gbkey | CDS |
| Protein Id | XP_013737970.1 |
| Location | complement(join(40561656..40562016,40562100..40562849,40563054..40563163)) |
| Gene | LOC106440778 |
| GeneID | 106440778 |
| Organism | Brassica napus |
Protein
| Length | 406aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_013882516.2 |
| Definition | probable pectate lyase 18 [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | G |
| Description | Pectate lyase |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction |
R02361
[VIEW IN KEGG] R06240 [VIEW IN KEGG] |
| KEGG_rclass |
RC00049
[VIEW IN KEGG] RC00705 [VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] |
| KEGG_ko |
ko:K01728
[VIEW IN KEGG] |
| EC |
4.2.2.2
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00040
[VIEW IN KEGG] ko02024 [VIEW IN KEGG] map00040 [VIEW IN KEGG] map02024 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0008150 [VIEW IN EMBL-EBI] GO:0009605 [VIEW IN EMBL-EBI] GO:0009607 [VIEW IN EMBL-EBI] GO:0009624 [VIEW IN EMBL-EBI] GO:0016020 [VIEW IN EMBL-EBI] GO:0043207 [VIEW IN EMBL-EBI] GO:0050896 [VIEW IN EMBL-EBI] GO:0051704 [VIEW IN EMBL-EBI] GO:0051707 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGCAGACGAAGAAGCTCTTTATCTCCATACTCTCCTTTCTTCTCTATGCTCCACTGATCTTCTCTTCACCAGTCCCAGACCCAGAAGCCATCGTCGAAGAAGTTCACAAGAGCATCAACGCATCGGTCGCAGCACGGAGGAAGCTAGGCTACCTCTCCTGCACCACCGGCAACCCAATCGACGACTGCTGGCGCTGCGACCCACACTGGGAGTCCCACCGTCACCGCCTCGCCGACTGCGCCATCGGGTTCGGCAAAAACGCCATCGGCGGCCGCGACGGTCGCATCTACGTCGTCACCGACTCAGGCAACGACGACCCGGTGACCCCCAAGCCCGGAACTTTACGCCACGCCGTGGTCCAGGACGAGCCCCTCTGGATCATCTTCCAGCGAGACATGACCATCCGCCTCAAAGAGGAGCTCATCATGAACTCTTTCAAAACCATCGACGGCCGCGGCGCCTCCGTGCACATCGCCGGCGGGCCTTGCGTCACGATCCAGTACGTGACGAACATCATCATCCACGGGGTTCACATCCACGACTGCAAGCGAGGCGGGAACGCTATGGTGCGGAGCTCGCCGAGGCACTACGGGTGGAGAACGGTGTCTGACGGTGACGGTGTGTCGATCTTCGGAGGGAGTCATGTTTGGGTTGATCACTGTTCGTTGTCTAACTGTGAAGATGGGCTTATTGATGCTATAATGGGCTCGACGGCGATTACTTTGTCTAATAACTACATGACGCATCATGATAAGGTTATGTTGCTTGGGCATAGTGATACTTACGTTCGTGACAAGAACATGCAGATTACTATTGCTTTTAATCATTTTGGTGAAGGGCTTGTTCAAAGAATGCCAAGGTGTAGACATGGGTACTTCCATGTGGTGAACAATGACTATACACATTGGGAGATGTATGCGATTGGTGGAAGTGCTAATCCTACTATCAATAGTCAAGGGAATAGATTTGTGGCTCCGAATATTAGATTCAGCAAAGAGGTGACTAAGCATGAGGATGCGCCGGAGAGTGAGTGGAAGAGATGGAATTGGAGATCATCTGGTGATTTGTTGTTAAACGGTGCGTTTTTTACTCCGTCCGGTGGTGCTCAGTCGTCTAGCTATGCTAAGGCGTCGAGTCTTGGGGCGAAACCGTCTTCTCTTGTTGGACCATTGACGGTGGGTTCTGGTGCACTCAATTGCCGTAAGGGTTCTCGTTGCTGA |
| Protein: MQTKKLFISILSFLLYAPLIFSSPVPDPEAIVEEVHKSINASVAARRKLGYLSCTTGNPIDDCWRCDPHWESHRHRLADCAIGFGKNAIGGRDGRIYVVTDSGNDDPVTPKPGTLRHAVVQDEPLWIIFQRDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCVTIQYVTNIIIHGVHIHDCKRGGNAMVRSSPRHYGWRTVSDGDGVSIFGGSHVWVDHCSLSNCEDGLIDAIMGSTAITLSNNYMTHHDKVMLLGHSDTYVRDKNMQITIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFVAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAQSSSYAKASSLGAKPSSLVGPLTVGSGALNCRKGSRC |